The detailed information of tRNA gene sequence


Sequence ID>WENV170972478
Genome IDMTKX01031794
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 269
End posion on genome 356
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actgttggat
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGAGGGGCTTGCTCCT
CCGGGGGTTCGAATCCCTCACTCTCCGCtt
Downstream region at tRNA end position 
aatatcccct
Secondary structure (Cloverleaf model)
>WENV170972478	Ser	TGA
                   t      GCtt aatatcccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGGGCTTGCTCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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