The detailed information of tRNA gene sequence


Sequence ID>WENV170972482
Genome IDMTKX01032180
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2923
End posion on genome 2850
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agcgccgctt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGCACAGCGTTTGGGACGCTGGGGTCGGAGGTTCGAGT
CCTCTCACCCCGACtt
Downstream region at tRNA end position 
tgcgggtgta
Secondary structure (Cloverleaf model)
>WENV170972482	Pro	TGG
                   t      ACtt tgcgggtgta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G G A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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