The detailed information of tRNA gene sequence


Sequence ID>WENV170972488
Genome IDMTKX01032370
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 858
End posion on genome 771
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctctgcttgt
tRNA gene sequence 
GGAGAGGTCGCATAGCTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGATGAGGTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCtc
Downstream region at tRNA end position 
tttttgttta
Secondary structure (Cloverleaf model)
>WENV170972488	Ser	GGA
                   t      GCtc tttttgttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        C      | | | | |     G
  G         T A C G       G C G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TATACCGATGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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