The detailed information of tRNA gene sequence


Sequence ID>WENV170972497
Genome IDMTKX01032576
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6413
End posion on genome 6501
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tattttttaT
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTTAAAGCGGCAGTCTTGAAAACTGTTGTGGGTTTATACCCA
CCCCGAGTTCGAATCTCGGCCTCTCCGTag
Downstream region at tRNA end position 
ttttatttat
Secondary structure (Cloverleaf model)
>WENV170972497	Ser	TGA
                   T      GTag ttttatttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C T C     A
      C G A        G      | | | | |     G
    G       G T C G       C C G A G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGTGGGTTTATACCCACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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