The detailed information of tRNA gene sequence


Sequence ID>WENV170972509
Genome IDMTKX01032779
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1
End posion on genome 86
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGGATGGCCGAGCGGCCTATGGCGCCTGTCTTGAAAACAGGTGTGGGGCAACCCACC
GGGGGTTCGAATCCCTCTCCCTCCGCtg
Downstream region at tRNA end position 
aacacttact
Secondary structure (Cloverleaf model)
>WENV170972509	Ser	TGA
                   n      GCtg aacacttact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    C       T G G C
      C T A        G     TGTGGGGCAACCCACC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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