The detailed information of tRNA gene sequence


Sequence ID>WENV170972510
Genome IDMTKX01032779
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 114
End posion on genome 205
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattccatcc
tRNA gene sequence 
GGGGAGGTGCCAGAGAGGCTGATTGGGCTCGCCTGCTAAGTGAGTGCGGGGGTTAAACTC
CGCCGTGGGTTCGAATCCCACCCTCCCCGCCT
Downstream region at tRNA end position 
gaaacatgga
Secondary structure (Cloverleaf model)
>WENV170972510	Ser	GCT
                   c      GCCT gaaacatgga
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    C       T T G G
      T G A        G     TGCGGGGGTTAAACTCCGCC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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