The detailed information of tRNA gene sequence


Sequence ID>WENV170972513
Genome IDMTKX01033028
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1292
End posion on genome 1216
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgcccggcgc
tRNA gene sequence 
CGGGACGTGGCGCAGTCTGGTAGCGCACCTGCTTTGGGAGCAGGGGGTCGGCGGTTCAAG
TCCGCCCGTCCCGACCA
Downstream region at tRNA end position 
tcgtcttgtc
Secondary structure (Cloverleaf model)
>WENV170972513	Pro	TGG
                   c      ACCA tcgtcttgtc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C C G C C     A
      T G A        G      | | | | |     A
    C       C G C G       G G C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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