The detailed information of tRNA gene sequence


Sequence ID>WENV170972519
Genome IDMTKX01033342
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1213
End posion on genome 1124
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgggcatcc
tRNA gene sequence 
GGAGGGGTGGCTGAGCGGTCGAAAGCGCCGGTCTTGAAAACCGGTAGGCCCGCAAGGGTC
TCGTGGGTTCGAATCCCACCCCCTCCGCCG
Downstream region at tRNA end position 
ccgcaggcgt
Secondary structure (Cloverleaf model)
>WENV170972519	Ser	TGA
                   c      GCCG ccgcaggcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAGGCCCGCAAGGGTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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