The detailed information of tRNA gene sequence


Sequence ID>WENV170972522
Genome IDMTKX01033448
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 572
End posion on genome 663
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaacaaatt
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGCCGATTGGGCTCGCCTGCTAAGTGAGTGCTGGGATTTACCTC
AGCCGCGGGTTCGAATCCCGCCCTCCCCGCCA
Downstream region at tRNA end position 
gaagaacgcc
Secondary structure (Cloverleaf model)
>WENV170972522	Ser	GCT
                   t      GCCA gaagaacgcc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G       + | | |                 T T
    C       T T G G
      C G A        G     TGCTGGGATTTACCTCAGCC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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