The detailed information of tRNA gene sequence


Sequence ID>WENV170972532
Genome IDMTKX01033781
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1729
End posion on genome 1813
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaataaaaaa
tRNA gene sequence 
GGAAAGGTGTCCGAGAGGCCTAAGGAGCACGCTTGGAAAGCGTGTGTAGCGCAAGTTACC
GAGGGTTCGAATCCCTCCCTTTCCGaaa
Downstream region at tRNA end position 
agtgcccgcg
Secondary structure (Cloverleaf model)
>WENV170972532	Ser	GGA
                   a      Gaaa agtgcccgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTAGCGCAAGTTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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