The detailed information of tRNA gene sequence


Sequence ID>WENV170972534
Genome IDMTKX01033843
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 578
End posion on genome 652
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gttctttaac
tRNA gene sequence 
GGTCCATTCGTCTAGTGGTTAGGACGTCAGGTTTTCATCCTGGTAACAGGGGTTCGATTC
CCCTATGGACTACAA
Downstream region at tRNA end position 
aattttatat
Secondary structure (Cloverleaf model)
>WENV170972534	Glu	TTC
                   c      ACAA aattttatat
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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