The detailed information of tRNA gene sequence


Sequence ID>WENV170972535
Genome IDMTKX01033853
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2328
End posion on genome 2405
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcattattat
tRNA gene sequence 
GCCCGAGTGGTGTAGCCCGGCCCATCATCCAAGACTGTCACTCTTGTGACTCGGGTTCAA
ATCCCGACTCGGGCGCCA
Downstream region at tRNA end position 
taataatccc
Secondary structure (Cloverleaf model)
>WENV170972535	Asp	GTC
                   t      GCCA taataatccc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     A G C C C     A
    C C G A        G      | | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C C A        C     TGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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