The detailed information of tRNA gene sequence


Sequence ID>WENV170972537
Genome IDMTKX01034005
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 297
End posion on genome 206
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaaaagata
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTTGAACGGGACGGTCTCGAAAACCGTTGTATCTTTTTACAGG
TACCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
gttaaaaaag
Secondary structure (Cloverleaf model)
>WENV170972537	Ser	CGA
                   a      GCCA gttaaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTATCTTTTTACAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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