The detailed information of tRNA gene sequence


Sequence ID>WENV170972543
Genome IDMTKX01034305
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 81954
End posion on genome 82029
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agttgcgttt
tRNA gene sequence 
GGGGCTGTAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGCCAGGGGTTCGAGT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
aatcgacgat
Secondary structure (Cloverleaf model)
>WENV170972543	Ala	GGC
                   t      ACCA aatcgacgat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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