The detailed information of tRNA gene sequence


Sequence ID>WENV170972544
Genome IDMTKX01034305
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1012
End posion on genome 923
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgcatcct
tRNA gene sequence 
GGAGAGGTAGCATAGTTTGGCCGAATGCGCACGATTGGAAATCGTGTGAGGGTAAAACCT
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
agagacagga
Secondary structure (Cloverleaf model)
>WENV170972544	Ser	GGA
                   t      GCCA agagacagga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        A      | | | | |     G
  T         T A C G       G C G G G     C
  G         | | | |                 T T
  G         A T G C
    C C G A        G     TGAGGGTAAAACCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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