The detailed information of tRNA gene sequence


Sequence ID>WENV170972559
Genome IDMTKX01034806
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 895
End posion on genome 801
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggaaaaacat
tRNA gene sequence 
GGAGAGATGGCTGAGCCTGGTTGAAAGCGCTCGACTCGAAATCGAGTAAGGGTATGATGA
ATACTCTTCGGGGGTTCGAATCCCTCTCTCTCCGCtt
Downstream region at tRNA end position 
attaaaagaa
Secondary structure (Cloverleaf model)
>WENV170972559	Ser	CGA
                   t      GCtt attaaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G T C G       G G G G G     C
  G           | | |                 T T
  G         A A G C
    T T G A        G     TAAGGGTATGATGAATACTCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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