The detailed information of tRNA gene sequence


Sequence ID>WENV170972568
Genome IDMTKX01035540
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 383
End posion on genome 307
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnngc
tRNA gene sequence 
GGGGGCGTAGTTAAGACGGTTATAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ttttcttatc
Secondary structure (Cloverleaf model)
>WENV170972568	Asp	GTC
                   c      GCCA ttttcttatc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
      A G A        A      + | | | |     G
    C       A T T G       G C G A G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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