The detailed information of tRNA gene sequence


Sequence ID>WENV170972570
Genome IDMTKX01035718
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3047
End posion on genome 3120
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccacgtacct
tRNA gene sequence 
GGGGGCGTAGTGTAGTGGTTAACATGTCGGCCTGTCAAGCCGAAGATCGCGGGTTCGAAT
CCCGTCGCTCCCGCac
Downstream region at tRNA end position 
ttccgtccgt
Secondary structure (Cloverleaf model)
>WENV170972570	Asp	GTC
                   t      GCac ttccgtccgt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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