The detailed information of tRNA gene sequence


Sequence ID>WENV170972584
Genome IDMTKX01036761
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 731
End posion on genome 639
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaagcggt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGACGAAGGCGTTCGCCTGCTAAGCGAATGTAGGGTCAAAAGCT
CTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cccatactaa
Secondary structure (Cloverleaf model)
>WENV170972584	Ser	GCT
                   t      GCCA cccatactaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGTAGGGTCAAAAGCTCTACC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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