The detailed information of tRNA gene sequence


Sequence ID>WENV170972585
Genome IDMTKX01036886
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 592
End posion on genome 497
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcttaagctt
tRNA gene sequence 
GGGAGTGGATGAGTCCCGGTGGGCTTTCCGGTCTTCAAAACCGGTGACGGGTCGCGTTGC
GGGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
agaaacggnn
Secondary structure (Cloverleaf model)
>WENV170972585	SeC(p)	TCA
                   t      GCCt agaaacggnn
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          T     TGACGGGTCGCGTTGCGGGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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