The detailed information of tRNA gene sequence


Sequence ID>WENV170972588
Genome IDMTKX01037046
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1870
End posion on genome 1796
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnnnnaT
tRNA gene sequence 
GGTCCTGTAGCTCAATTGGCAGAGCAAGCGCCTCTTAAGCGTTAGGTTCTCGGTTCGAGT
CCGAGCAGGATCATtt
Downstream region at tRNA end position 
tccttttaat
Secondary structure (Cloverleaf model)
>WENV170972588	Lys	CTT
                   T      ATtt tccttttaat
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G A G C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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