The detailed information of tRNA gene sequence


Sequence ID>WENV170972614
Genome IDMTKX01038223
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 239822
End posion on genome 239749
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcagaaaata
tRNA gene sequence 
CGCGGGGTGGAGCAGCCAGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGGACGTTCAAA
TCGTCTCCCCGCAAtta
Downstream region at tRNA end position 
gaaaaataag
Secondary structure (Cloverleaf model)
>WENV170972614	Met	CAT
                   a      Atta gaaaaataag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T G C     A
      C G A        G      + | | | |     A
    C       C G A G       G G A C G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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