The detailed information of tRNA gene sequence


Sequence ID>WENV170972634
Genome IDMTKX01038252
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 163696
End posion on genome 163620
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgttcttt
tRNA gene sequence 
GGCGGCGTAGCTCAGGCTGGTAGAGCAAACGGCTCATACCCGTTGCGTCGGTGGTTCAAG
TCCACTCGCCGCCACTA
Downstream region at tRNA end position 
gccttaaact
Secondary structure (Cloverleaf model)
>WENV170972634	Met	CAT
                   t      ACTA gccttaaact
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    C       C T C G       G G T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GCGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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