The detailed information of tRNA gene sequence


Sequence ID>WENV170972639
Genome IDMTKX01038308
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8841
End posion on genome 8766
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ccgccgctag
tRNA gene sequence 
GCGCCCGTAGCTCAGGGGACAGAGCGTTGGCCTCCGGAGCCAAAGGCCGCAGGTTCAAAT
CCTGCCGGGCGTACCA
Downstream region at tRNA end position 
gctcctccaa
Secondary structure (Cloverleaf model)
>WENV170972639	Arg	CCG
                   g      ACCA gctcctccaa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      G G A        A      | | | | |     A
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    A       G A G C
      C A          G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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