The detailed information of tRNA gene sequence


Sequence ID>WENV170972644
Genome IDMTKX01038710
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12075
End posion on genome 11987
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagtgttttC
tRNA gene sequence 
GGAGAGGTCGCATAGCCCGGTTGAGTGCGCGCGCTTGGAGAGCGTGTGACCCGAAAGGGT
CCGGGAGTTCGAATCTCCCCCTCTCCGTag
Downstream region at tRNA end position 
tttaaattgt
Secondary structure (Cloverleaf model)
>WENV170972644	Ser	GGA
                   C      GTag tttaaattgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C C G A        C      | | | | |     G
  C         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    T T G A        G     TGACCCGAAAGGGTCC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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