The detailed information of tRNA gene sequence


Sequence ID>WENV170972645
Genome IDMTKX01038710
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4513
End posion on genome 4420
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cataatatct
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCGGCGGTTTGCTAAACCGCTGTACGGGTGAAAACC
CGTACCTGGGGTTCAAATCCCCACCCTTCCGCCA
Downstream region at tRNA end position 
tagttgacgc
Secondary structure (Cloverleaf model)
>WENV170972645	Ser	GCT
                   t      GCCA tagttgacgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A C C C C     A
      T G A        G      | | | | |     A
    G       G C C G       T G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGGGTGAAAACCCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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