The detailed information of tRNA gene sequence


Sequence ID>WENV170972676
Genome IDMTKX01041912
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 175
End posion on genome 105
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcatgtttag
tRNA gene sequence 
GGGTGCGTAGGCTAGTGGTAAACTGGACGGCTCCAGACCGTCATTTGCAGGTTCGATTCC
TGCCGCGCCCAttt
Downstream region at tRNA end position 
tattttatca
Secondary structure (Cloverleaf model)
>WENV170972676	Trp	CCA
                   g      Attt tattttatca
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          T T
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     T C G G       G C A G G     C
      G     |   | +                 T T
      G     A A C T
        T A        G     ATTT
                    G - C
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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