The detailed information of tRNA gene sequence


Sequence ID>WENV170972695
Genome IDMTKX01043852
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 719
End posion on genome 644
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaaaatgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGACGGTTCGAGT
CCGTCCCCCGCTACCA
Downstream region at tRNA end position 
aatcaaaaca
Secondary structure (Cloverleaf model)
>WENV170972695	Met	CAT
                   c      ACCA aatcaaaaca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T G C C     A
      T G A        G      | | | | |     G
    T       C G A G       G A C G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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