The detailed information of tRNA gene sequence


Sequence ID>WENV170972696
Genome IDMTKX01043852
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 562
End posion on genome 486
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcggtcttgt
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCATGCGGCTCATATCCGCAGTGTCGAGGGTTCGAG
TCCCCCCACCGCTACCT
Downstream region at tRNA end position 
ttttcttccc
Secondary structure (Cloverleaf model)
>WENV170972696	Met	CAT
                   t      ACCT ttttcttccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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