The detailed information of tRNA gene sequence


Sequence ID>WENV170972698
Genome IDMTKX01044063
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 961
End posion on genome 887
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aactattaac
tRNA gene sequence 
GGCCCCGTCGTCTAGCGGCCTAGGACATCACTCTTTCAAGGTGGAGATCACGGGTTCGAA
TCCCGTCGGGGTCACtt
Downstream region at tRNA end position 
ttctctcccc
Secondary structure (Cloverleaf model)
>WENV170972698	Glu	TTC
                   c      ACtt ttctctcccc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    T + G
                    C - G
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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