The detailed information of tRNA gene sequence


Sequence ID>WENV170972744
Genome IDMTKX01047837
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3062
End posion on genome 2985
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgttctgtcc
tRNA gene sequence 
GGGGTCGTAGCTCAGTTTGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGGGTTCGA
GCCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
gaatcccacg
Secondary structure (Cloverleaf model)
>WENV170972744	Asp	GTC
                   c      GCCA gaatcccacg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          C G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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