The detailed information of tRNA gene sequence


Sequence ID>WENV170972759
Genome IDMTKX01049332
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 488
End posion on genome 401
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaatagtcg
tRNA gene sequence 
GGAGACGTGTCCGAACTGGCTAAGGGGCCGGTCTTGAAAACCGGTGGAGCCATGCTCCGT
GTGGGTTCGAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
aaaaaggagt
Secondary structure (Cloverleaf model)
>WENV170972759	Ser	TGA
                   g      GCCA aaaaaggagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | +                 T T
    G       A G G G
      C T A        G     TGGAGCCATGCTCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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