The detailed information of tRNA gene sequence


Sequence ID>WENV170972774
Genome IDMTKX01051764
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 839
End posion on genome 927
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccatcctgtC
tRNA gene sequence 
GGAGGCGTGCCCGAGCGGCTGAAGGGACCGGTTTTGAAAACCGGCGTGCGGGAAACCGTA
CCGGGGGTTCGAATCCCTCCGCCTCCGTtc
Downstream region at tRNA end position 
tgcgtcgctc
Secondary structure (Cloverleaf model)
>WENV170972774	Ser	TGA
                   C      GTtc tgcgtcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     CGTGCGGGAAACCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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