The detailed information of tRNA gene sequence


Sequence ID>WENV170972785
Genome IDMTKY01000677
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1636
End posion on genome 1565
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgtcgtgc
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTAGAGCGGACGGCTCATAACCGTTTGGTCCCTGGTTCGAATC
CGGGTGGGCCCAttc
Downstream region at tRNA end position 
ttcacaccgt
Secondary structure (Cloverleaf model)
>WENV170972785	Met	CAT
                   c      Attc ttcacaccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | + | |     G
      C     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    G + T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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