The detailed information of tRNA gene sequence


Sequence ID>WENV170972788
Genome IDMTKY01000721
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1010
End posion on genome 936
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agggtgttgt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTCAGAGCACACGGCTCATACCCGTGGCGTCGTCGGTTCAAG
TCCGACCTCCGCTACtt
Downstream region at tRNA end position 
tccttccttc
Secondary structure (Cloverleaf model)
>WENV170972788	Met	CAT
                   t      ACtt tccttccttc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GCGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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