The detailed information of tRNA gene sequence


Sequence ID>WENV170972798
Genome IDMTKY01002031
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1047
End posion on genome 974
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaccgaatac
tRNA gene sequence 
GGGGGCTTAGCTCAGTTGGTAGAGCATCGCCTTTGCAAGGCGAGGGTCAGGGGTTCGAAT
CCCCTAGCCTCCACtg
Downstream region at tRNA end position 
tgtgatgagt
Secondary structure (Cloverleaf model)
>WENV170972798	Ala	TGC
                   c      ACtg tgtgatgagt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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