The detailed information of tRNA gene sequence


Sequence ID>WENV170972803
Genome IDMTKY01002451
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1104
End posion on genome 1195
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accgcctcgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGGTCTCGAAAACCGTTAGACGTCGTTCGGCG
TCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttggcaggca
Secondary structure (Cloverleaf model)
>WENV170972803	Ser	CGA
                   c      GCCA ttggcaggca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAGACGTCGTTCGGCGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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