The detailed information of tRNA gene sequence


Sequence ID>WENV170972815
Genome IDMTKY01002582
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 513
End posion on genome 439
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccacagtcac
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCGGAAGACTCATAATCTTTTGGTCGCAGGTTCAAG
TCCTGCAGGGCCCACac
Downstream region at tRNA end position 
ccccccctgc
Secondary structure (Cloverleaf model)
>WENV170972815	Met	CAT
                   c      ACac ccccccctgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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