The detailed information of tRNA gene sequence


Sequence ID>WENV170972821
Genome IDMTKY01002669
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12155
End posion on genome 12239
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaaaaaaaa
tRNA gene sequence 
GGAGAAGTGTCTGAGTGGCCGAAGGAGCACGGTTGGAAACCGTGTGTAGCGCAAGCTACC
GAGGGTTCGAATCCCTCCTTCTCCGaat
Downstream region at tRNA end position 
tccatcagct
Secondary structure (Cloverleaf model)
>WENV170972821	Ser	GGA
                   a      Gaat tccatcagct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      C G A        G     TGTAGCGCAAGCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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