The detailed information of tRNA gene sequence


Sequence ID>WENV170972823
Genome IDMTKY01002693
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16978
End posion on genome 16888
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acacgatttc
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTTGATTGGGACGGTCTCGAAAACCGTTATGGTCCTTGTGGCC
ATCGTGGGTTCGAACCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gttcaatact
Secondary structure (Cloverleaf model)
>WENV170972823	Ser	CGA
                   c      GCCA gttcaatact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TATGGTCCTTGTGGCCATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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