The detailed information of tRNA gene sequence


Sequence ID>WENV170972829
Genome IDMTKY01002809
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2998
End posion on genome 2909
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcgcgtccc
tRNA gene sequence 
GGAAGTGTGGCCGAGTGGTTTAAGGCTCTGGTCTTGAAAACCAGCGTGGGGGAGACCCCA
CCGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
cgaccatctg
Secondary structure (Cloverleaf model)
>WENV170972829	Ser	TGA
                   c      GCCA cgaccatctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        T     CGTGGGGGAGACCCCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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