The detailed information of tRNA gene sequence


Sequence ID>WENV170972857
Genome IDMTKY01003281
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 336
End posion on genome 262
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcgagcaT
tRNA gene sequence 
GGTGGCGTAGCTCAGTCGGTAGAGCAAGCGGCTCATATCCGCTTGGTCAGGGGTTCAAGT
CCCTTCGCCACTAAtt
Downstream region at tRNA end position 
ccccgcaggt
Secondary structure (Cloverleaf model)
>WENV170972857	Met	CAT
                   T      AAtt ccccgcaggt
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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