The detailed information of tRNA gene sequence


Sequence ID>WENV170972861
Genome IDMTKY01003375
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1692
End posion on genome 1620
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cgttgcagcc
tRNA gene sequence 
GGGCCGCTAGCTCAGCAGGTAGAGCAACGCCCTTTTAAGGCGTGGGTCACTGGTTCGAAT
CCAGTGCGGCTCAgga
Downstream region at tRNA end position 
tcgtcgatgc
Secondary structure (Cloverleaf model)
>WENV170972861	Lys	TTT
                   c      Agga tcgtcgatgc
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    A       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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