The detailed information of tRNA gene sequence


Sequence ID>WENV170972872
Genome IDMTKY01003691
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5282
End posion on genome 5207
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cggaccggtg
tRNA gene sequence 
GTGGACGTAGCTCAGTTGGTAGAGCTCCAGGTTGTGGCCCTGGCGGTCGCGGGTTCAAGT
CCCGTCGTTCACCCCA
Downstream region at tRNA end position 
tccattcggg
Secondary structure (Cloverleaf model)
>WENV170972872	His	GTG
                   g      CCCA tccattcggg
                     G - C
                     T - A
                     G - C
                     G + T
                     A - T
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     CGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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