The detailed information of tRNA gene sequence


Sequence ID>WENV170972877
Genome IDMTKY01003772
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2803
End posion on genome 2728
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgcaccgac
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGTTGTTGGGGGTTCAAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
agtccgcaaa
Secondary structure (Cloverleaf model)
>WENV170972877	Trp	CCA
                   c      GCCA agtccgcaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     TTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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