The detailed information of tRNA gene sequence


Sequence ID>WENV170972878
Genome IDMTKY01003778
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4622
End posion on genome 4546
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcctctttt
tRNA gene sequence 
CTGGCTATAGCGCAGCCTGGTAGCGCACCTGCTTTGGGAGCAGGTTGTCGCAGGTTCAAA
TCCTGCTAGCCAGACCA
Downstream region at tRNA end position 
ttttcctgcg
Secondary structure (Cloverleaf model)
>WENV170972878	Pro	TGG
                   t      ACCA ttttcctgcg
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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