The detailed information of tRNA gene sequence


Sequence ID>WENV170972890
Genome IDMTKY01003961
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4992
End posion on genome 4903
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgccccgac
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGCTGTACGGGGAACCGTA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
accaacttca
Secondary structure (Cloverleaf model)
>WENV170972890	Ser	TGA
                   c      GCCA accaacttca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTACGGGGAACCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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