The detailed information of tRNA gene sequence


Sequence ID>WENV170972918
Genome IDMTKY01004810
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2743
End posion on genome 2818
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
catgctccgt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGACT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
cgatagaatc
Secondary structure (Cloverleaf model)
>WENV170972918	Ala	GGC
                   t      ACCA cgatagaatc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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