The detailed information of tRNA gene sequence


Sequence ID>WENV170972923
Genome IDMTKY01004903
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1056
End posion on genome 1131
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctgaggattt
tRNA gene sequence 
GGGGGGTTAGCTCAGTTGGTAGAGCGCCTGAATGGCATTCAGGAGGTCGGGAGTTCGAAC
CTCCTACCCTCCACCA
Downstream region at tRNA end position 
aatcccggac
Secondary structure (Cloverleaf model)
>WENV170972923	Ala	GGC
                   t      ACCA aatcccggac
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     T - A          C A
                    T     T C C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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