The detailed information of tRNA gene sequence


Sequence ID>WENV170972941
Genome IDMTKY01005336
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 525
End posion on genome 436
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcggggtac
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCGAGTGCGCACGATTGGAAATCGTGTAACCCGCAAGGGT
TCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ggatctggaa
Secondary structure (Cloverleaf model)
>WENV170972941	Ser	GGA
                   c      GCCA ggatctggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     A
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAACCCGCAAGGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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